Genetic Markers Used in Molecular Phylogeny Studies, Research on Endangered Cattle Breeds
Keywords:
endangered cattle breeds, phylogenetic analysis, genetic diversity, genetic markersAbstract
In molecular phylogenetic analysis, the sequence of a common gene or protein can be used to evaluate the evolutionary relationship of the different cattle breeds. In order to evaluate the evolutionary relationships of different species, phylogenetic analysis is very important. By analyzing some genetic markers, can be deduced the evolution rate and the migration rate of the endangered cattle populations. This paper, aims to review the most important genetic markers, used in molecular phylogeny studies in cattle breeds. Thieu Phan Xuan et. al. studied the phylogenetic relations of Romanian cattle breeds to various other cattle breeds including Bos taurus, Bos indicus (Indian zebu), Bison bison and Bison bonasus, using mtDNA D-loop sequences. All studies concerne to the phylogenetic relashionship of cattle brees, show that the sequences are closely related or have recently diverged.
References
Aranguren-Mendez, J., Gomez, M. and Jordana, J. Hierarchical analysis of genetic structure in Spanish
donkey breeds using microsatellite markers, Heredity 2002, 89, pp. 207–211. oi:10.1038/sj.hdy.6800117
Schäler, J., Addo, S., Thaller, G. and D. Hinrichs. Exploration of conservation and development strategies with a limited stakeholder approach for local cattle breeds, 2019, Animal, pp. 1-10, doi:10.1017/S1751731119001447.
Demir, E., Balcioglu, M.S. Genetic diversity and population structure of four cattle breeds raised in Turkey using microsatellite markers, 2019, Czech Journal of Animal Science, 64 (10): pp. 411–419. https://doi.org/10.17221/62/2019-CJAS.
Ladyka, V.I., Khmelnychyi, L.M., Lyashenko, Y.V., Kulibaba, R.O. Analysis of the genetic structure of a population of Lebedyn cattle by microsatellite markers, 2019, Regulatory Mechanisms in Biosystems, pp. 45-49. doi: 10.15421/021907.
Bennewitz, J., Kantanen, J., Tapio, I., Li, M.H., Kalm, E., Vilkki, J., Ammosov, I., Ivanova, Z., Kiselyova, T., Popov, R., Meuwisseng, T.H.E. Estimation of breed contributions to present and future genetic diversity of 44 North Eurasian cattle breeds using core set diversity measures, 2006, Genet. Sel. Evol. 38 (2006) pp. 201–220. DOI: 10.1051/gse:2005036.
Food and Agriculture Organization, 2000. Home page address: http://www.fao.org/home/en/.
Ginja, C., Penedo, M.C.T., Sobral, M.F., Matos, J., Borges, C., Neves, D., Rangel-Figueiredo, T., and Cravador, A. RMeseoarlceh cular genetic analysis of a cattle population to reconstitute the extinct Algarvia breed, 2010, Genetics Selection Evolution, pp. 42:18. doi: 10.1186/1297-9686-42-18.
Tapio, I., Varv, S., Bennewitz, J., Maleviciute, J., Fimland, E., Grislis, Z., Meuwissen, T.H.E., Miceikiene, I. Olsaker, I., Viinalass, H., Vilkki, J., and Kantanen, J. 2006. Prioritization for Conservation of Northern European Cattle Breeds Based on Analysis of Microsatellite Data, Conservation Biology, 20 (6), pp. 1768–1779. DOI: 10.1111/j.1523-1739.2006.00488x.
Nature, 2014. Home page address: http:// https://www.nature.com/.
Mohapatra, S.K., Kumar-Nayak, V., Paul, A., and Adhikary, S. Mitochondrial DNA: A Molecular Tool for Assessment of Genetic Diversity, 2019, International Journal of Livestock Research, 9 (8), DOI 10.5455/ijlr.20190404113609.
Guo, X, Ding, X., Wu, X., Bao, P., Xiong, L., Yan, P.,
Pei, J., Complete mitochondrial genome of Anxi cattle (Bos taurus), 2017, Conservation Genet Resour, DOI 10.1007/s12686-017-0833-y.
Kumar-Pramod, R., Velayutham, D., Sajesh, P. K., Beena, P. S., Zachariah, A., Zachariah, A., Chandramohan, B., Sujith, S. S., Ganapathi, P., Dhinoth-Kumar, B., Iype, S., Gupta, R., Santhosh, S., Thomas, G., Complete mitogenome reveals genetic divergence and phylogenetic relationships among Indian cattle (Bos indicus) breeds, 2018, Animal Biotechnology, pp. 1-13, DOI: 10.1080/10495398.2018.1476376.